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Yakushima traverse
I did this hike through out of the main seaon in October. That gave me a comfort to be sure to sleep in huts.
During the high season the huts might be full and you might need a tent or be there really early. First comes, first serves.
The huts are self-service.
Self-service huts
Access by: Bus to the trail head, Ferry from Kagoshima to get to the island
What's nearby:
The end of the trail is by rails
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End of Rails
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Yakushima
Trekking ethiquete in Yakushima.
Japan
Transportation
Railpass gets you anywhere by train. It needs to be purchsed before entering Japan. It is valid also for city lines and JR. It does not apply only to the fastest (most direct) trains.
Train schedules are spot on (seconds). Traveling speed over 260 km/h.
Google maps cover public transportation.
Car drive is extremely slow due to traffic and speed limits (often 50 km/h even out of city). Highway is couple of times more expensive than a train, but fast.
There is no rule on unsigned cross-roads: no priority/give way to a traffic from the right, so everyone drives slow and reaches consensus.
In most cities is good to rent a bike. Sometimes even hostels offer that.
Almost all traffic/navigation signs are also written in latin.
Maps
Mapy.cz are fine for tourist trails.
Geographical Survey Institute of Japan (third party app Android/iOs) offer a possibility of a bit detailed topo maps at higher scale.
Accomodation
Airbnb, HostelWorld and Booking.com have good coverage.
Info points on train stations can guide on accomodation or maps.
Local info
Great source of local info japan-guide.com
Weekends and hollidays can be busy: hostels and car rentals can be booked. If hollidays are on weekends, it's delayed to Monday. And galeries closed on Monday are closed on Tuesday.
Phone & Internet
Prepaid data sim is sold only by bmobile (1 GB / 3500 ¥ (360 MB FUP/3 days). Must be activated from a japan phone (ask seller). Econnectjapan.com can send activated to your hotel (order 5 days in advacne).
Voice/tarif can' be purchsed by foreigners (Skype OK). You can also rent a protable WiFi router (e. g. on airport) if you want to carry it.
Some European phones might not work with Japan SIM despite not being blocked by an operator. Second-hand phones are cheap though.